BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032E11SP1|AL429588
(853 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1565 1580 0.0
>3x_Contig1565
Length = 10922
Score = 1580 bits (797), Expect = 0.0
Identities = 848/859 (98%), Gaps = 6/859 (0%)
Strand = Plus / Minus
Query: 1 tagtaccgggctttcttggtgataaatttatagacagagtagtattttcgtctttcctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9359 tagtaccgggctttcttggtgataaatttatagacagagtagtattttcgtctttcctca 9300
Query: 61 tcaaattagagaaattaatattctctgaaagaaactgcttatatgcatcaggtatcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9299 tcaaattagagaaattaatattctctgaaagaaactgcttatatgcatcaggtatcttta 9240
Query: 121 cctcatccttgctggcaccactatgagcgtttgctatttgaatcttgatggtttgaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9239 cctcatccttgctggcaccactatgagcgtttgctatttgaatcttgatggtttgaactg 9180
Query: 181 aacaaagtgtg--aacgncggtaaagtta-gtaaaccaggctcatctcttgatt-atcat 236
|||||||||| |||| ||||||||||| || ||||||||||||||||||||| |||||
Sbjct: 9179 aacaaagtgttgcaacgacggtaaagttaagttaaccaggctcatctcttgatttatcat 9120
Query: 237 caat-cgagatccttatagggaatcaaacaatattacccaaggat-ctcaaagtctgcac 294
|||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 9119 caattcgagatccttatagggtatcaaacaatattacccaaggattctcaaagtctgcac 9060
Query: 295 atactctctctttccaatgcttcgatatcttgttgcacggcctctgtttcttccattagt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9059 atactctctctttccaatgcttcgatatcttgttgcacggcctctgtttcttccattagt 9000
Query: 355 aaccactgcagatgcgggacaaaggattgcagatgctaccgcccctctttcatcaacgga 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8999 aaccactgcagatgcgggacaaaggattgcagatgctaccgcccctctttcatcaacgga 8940
Query: 415 tttatcaaatgataatggagattcgaaacggctaaacttttcatttttgattcattaata 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8939 tttatcaaatgataatggagattcgaaacggctaaacttttcatttttgattcattaata 8880
Query: 475 cattgtcccaaagacgcgatgccggacaaataagagaagcagaagcattccgagagcagt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8879 cattgtcccaaagacgcgatgccggacaaataagagaagcagaagcattccgagagcagt 8820
Query: 535 gttgcctcaattctattttactttaatttacttatcgtgaggttagtgtactgtaaactt 594
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 8819 gttgcctcaattctatttcactttaatttacttatcgtgaggttagtgtactgtaaactt 8760
Query: 595 aatatatatgagcaatttcatttttagctttataggagtctatctgttggctactgaaat 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8759 aatatatatgagcaatttcatttttagctttataggagtctatctgttggctactgaaat 8700
Query: 655 aagtaactttctgcggttgtaaggatggcagcttgaaatgtttcactctttcagtgacaa 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8699 aagtaactttctgcggttgtaaggatggcagcttgaaatgtttcactctttcagtgacaa 8640
Query: 715 taacatgagcacaatctaacaccttcactggataccccacgaaaaatgctccaggcatat 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8639 taacatgagcacaatctaacaccttcactggataccccacgaaaaatgctccaggcatat 8580
Query: 775 tataggaaaactgggccaccagttcagacgttctcgttgctatacccacatctttccatt 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8579 tataggaaaactgggccaccagttcagacgttctcgttgctatacccacatctttccatt 8520
Query: 835 cattcattcttctgacata 853
|||||||||||||||||||
Sbjct: 8519 cattcattcttctgacata 8501
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6914
Number of Sequences: 1807
Number of extensions: 6914
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 853
length of database: 10,358,551
effective HSP length: 16
effective length of query: 837
effective length of database: 10,329,639
effective search space: 8645907843
effective search space used: 8645907843
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)